The Silene latifolia genome and its giant Y chromosome
Moraga C., Branco C., Rougemont Q., Jedlička P., Mendoza-Galindo E., Veltsos P., Hanique M., Rodríguez de la Vega R.C., Tannier E., Liu X., Lemaitre C., Fields P.D., Cruaud C., Labadie K., Belser C., Briolay C., Santoni S., Cegan R., Linheiro R., Adam G., Filali A.E., Mossion V., Boualem A., Tavares R., Chebbi A., Cordaux R., Fruchard C., Prentout D., Velt A., Spataro B., Delmotte S., Weingartner L., Toegelová H., Tulpová Z., Cápal P., Šimková H., Štorchová H., Krüger M., Abeyawardana O.A.J., Taylor D.R., Olson M.S., Sloan D.B., Karrenberg S., Delph L.F., Charlesworth D., Muyle A., Giraud T., Bendahmane A., Di Genova A., Madoui M.-A., Hobza R., Marais G.A.B.
SCIENCE 387: 630-636, 2025
Klíčová slova:
Abstrakt: In many species with sex chromosomes, the Y is a tiny chromosome. However, the dioecious plant Silene latifolia has a giant ~550-megabase Y chromosome, which has remained unsequenced so far. We used a long- and short-read hybrid approach to obtain a high-quality male genome. Comparative analysis of the sex chromosomes with their homologs in outgroups showed that the Y is highly rearranged and degenerated. Recombination suppression between X and Y extended in several steps and triggered a massive accumulation of repeats on the Y as well as in the nonrecombining pericentromeric region of the X, leading to giant sex chromosomes. Using sex phenotype mutants, we identified candidate sex-determining genes on the Y in locations consistent with their favoring recombination suppression events 11 and 5 million years ago.
DOI: 10.1126/science.adj7430
Fulltext: kontaktujte autory z ÚEB
Autoři z ÚEB: Oushadee Abeyawar..., Petr Cápal, Manuela Krüger, Hana Šimková, Helena Štorchová, Helena Toegelová ..., Zuzana Tulpová
SCIENCE 387: 630-636, 2025
Klíčová slova:
Abstrakt: In many species with sex chromosomes, the Y is a tiny chromosome. However, the dioecious plant Silene latifolia has a giant ~550-megabase Y chromosome, which has remained unsequenced so far. We used a long- and short-read hybrid approach to obtain a high-quality male genome. Comparative analysis of the sex chromosomes with their homologs in outgroups showed that the Y is highly rearranged and degenerated. Recombination suppression between X and Y extended in several steps and triggered a massive accumulation of repeats on the Y as well as in the nonrecombining pericentromeric region of the X, leading to giant sex chromosomes. Using sex phenotype mutants, we identified candidate sex-determining genes on the Y in locations consistent with their favoring recombination suppression events 11 and 5 million years ago.
DOI: 10.1126/science.adj7430
Fulltext: kontaktujte autory z ÚEB
Autoři z ÚEB: Oushadee Abeyawar..., Petr Cápal, Manuela Krüger, Hana Šimková, Helena Štorchová, Helena Toegelová ..., Zuzana Tulpová